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Sebastiani, P, Ramoni, M and Kohane IS. Bayesian Analysis of Differential Gene Expression. Under review. |
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The paper describing the method and its application to the analysis of differential gene expression experiments. You can read more about it at essays-service.com. |
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Comparison with stochastic computations. |
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Evaluation with the spiked-in experiment |
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Data (txt file) |
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Original Latin Square Design |
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Arrangement of the spiked-in genes in groups |
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List of spiked-in genes |
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Examples of patterns of the spiked-in genes |
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R-functions to run BADGE |
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R-functions to run the experiments |
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Other Data Sets
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Prostate cancer data set and lymphoma data set are avaialble from the Cancer Genomic Group, The Broad Institute |