Sebastiani, P, Ramoni, M and Kohane IS. Bayesian Analysis of Differential Gene Expression. Under review.
    The paper describing the method and its application to the analysis of differential gene expression experiments. You can read more about it at
  Comparison with stochastic computations.
  Evaluation with the spiked-in experiment
    Data (txt file)
    Original Latin Square Design
    Arrangement of the spiked-in genes in groups
    List of spiked-in genes
    Examples of patterns of the spiked-in genes
    R-functions to run BADGE
    R-functions to run the experiments


Other Data Sets

    Prostate cancer data set and lymphoma data set are avaialble from the Cancer Genomic Group, The Broad Institute


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